Structure of the formin Cdc12 bound to the barbed end of phalloidin-stabilized F-actin.
Resolution: 3.56 Å
EM Method: Single-particle
Fitted PDBs: 8rtt
Q-score: 0.444
Oosterheert W, Boiero Sanders M, Funk J, Prumbaum D, Raunser S, Bieling P
To Be Published
- Phosphate ion (94 Da, Ligand)
- Actin, cytoplasmic 1, n-terminally processed (41 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Dimeric fh2 domain of s. pombe cdc12 (Complex from Schizosaccharomyces pombe)
- Phalloidin. (Complex from Amanita phalloides)
- Phalloidin (808 Da, Protein from Amanita phalloides)
- Cell division control protein 12 (48 kDa, Protein from Schizosaccharomyces pombe)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Actin filament (Complex from Homo sapiens)
- Complex of the dimeric fh2 domain of s. pombe cdc12 bound to the barbed end of phalloidin stabilized f-actin. (Complex)
Density map for free recombinant gamma tubulin ring complex
Resolution: 7.0 Å
EM Method: Single-particle
Fitted PDBs: 8vrd
Q-score: 0.18
Aher A, Urnavicius L, Kapoor TM
To Be Published
- Gamma-tubulin complex component 5 (118 kDa, Protein from Homo sapiens)
- Actin, cytoplasmic 1 (41 kDa, Protein from Homo sapiens)
- Mitotic-spindle organizing protein 1 (8 kDa, Protein from Homo sapiens)
- Isoform 2 of gamma-tubulin complex component 4 (76 kDa, Protein from Homo sapiens)
- Isoform 3 of gamma-tubulin complex component 2 (105 kDa, Protein from Homo sapiens)
- Tubulin gamma-1 chain (52 kDa, Protein from Homo sapiens)
- Gamma tubulin ring complex (Complex from Homo sapiens)
- Tubgcp6 protein (199 kDa, Protein from Homo sapiens)
- Gamma-tubulin complex component 3 (103 kDa, Protein from Homo sapiens)
Resolution: 3.499 Å
EM Method: Single-particle
Fitted PDBs: 8cog
Q-score: 0.491
Pinto CS, Bakker SE, Suchenko A, Hussain H, Hatano T, Sampath K, Chinthalapudi K, Mishima M, Balasubramanian M
To Be Published
- Polymerised arginylated actin with bound adp (Complex from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Actin, cytoplasmic 1, n-terminally processed (41 kDa, Protein from Homo sapiens)
Structure of nucleosome-bound SRCAP-C in the apo state
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8x15
Q-score: 0.218
Yu J, Wang Q, Yu Z, Li W, Wang L, Xu Y
To Be Published
- Histone h2a type 1-c (14 kDa, Protein from Homo sapiens)
- Actin, cytoplasmic 1, n-terminally processed (41 kDa, Protein from Homo sapiens)
- Structure of nucleosome-bound srcap-c in the apo state (Complex from Homo sapiens)
- Ruvb-like 2 (51 kDa, Protein from Homo sapiens)
- Vacuolar protein sorting-associated protein 72 homolog (40 kDa, Protein from Homo sapiens)
- Histone h3.1 (15 kDa, Protein from Homo sapiens)
- Yeats domain-containing protein 4 (26 kDa, Protein from Homo sapiens)
- Actin-like protein 6a (47 kDa, Protein from Homo sapiens)
- Ruvb-like 1 (50 kDa, Protein from Homo sapiens)
- Dna (137-mer) (42 kDa, DNA from synthetic construct)
- Actin-related protein 6 (45 kDa, Protein from Homo sapiens)
- Histone h2b type 1-c/e/f/g/i (13 kDa, Protein from Homo sapiens)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Dna methyltransferase 1-associated protein 1 (53 kDa, Protein from Homo sapiens)
- Helicase srcap (343 kDa, Protein from Homo sapiens)
- Zinc finger hit domain-containing protein 1 (17 kDa, Protein from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Dna (137-mer) (41 kDa, DNA from synthetic construct)
- Histone h4 (11 kDa, Protein from Homo sapiens)
Structure of nucleosome-bound SRCAP-C in the ADP-BeFx-bound state
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8x19
Q-score: 0.292
Yu J, Wang Q, Yu Z, Li W, Wang L, Xu Y
To Be Published
- Histone h2a type 1-c (14 kDa, Protein from Homo sapiens)
- Ruvb-like 2 (51 kDa, Protein from Homo sapiens)
- Vacuolar protein sorting-associated protein 72 homolog (40 kDa, Protein from Homo sapiens)
- Histone h3.1 (15 kDa, Protein from Homo sapiens)
- Yeats domain-containing protein 4 (26 kDa, Protein from Homo sapiens)
- Actin-like protein 6a (47 kDa, Protein from Homo sapiens)
- Ruvb-like 1 (50 kDa, Protein from Homo sapiens)
- Actin-related protein 6 (45 kDa, Protein from Homo sapiens)
- Actin, cytoplasmic 1 (41 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Histone h2b type 1-c/e/f/g/i (13 kDa, Protein from Homo sapiens)
- Dna (147-mer) (45 kDa, DNA from Homo sapiens)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Beryllium trifluoride ion (66 Da, Ligand)
- Dna methyltransferase 1-associated protein 1 (53 kDa, Protein from Homo sapiens)
- Helicase srcap (343 kDa, Protein from Homo sapiens)
- Structure of nucleosome-bound srcap-c in the adp-befx-bound state (Complex from Homo sapiens)
- Zinc finger hit domain-containing protein 1 (17 kDa, Protein from Homo sapiens)
- Dna (147-mer) (45 kDa, DNA from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Histone h4 (11 kDa, Protein from Homo sapiens)
Structure of nucleosome-bound SRCAP-C in the ADP-bound state
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8x1c
Q-score: 0.297
Yu J, Wang Q, Yu Z, Li W, Wang L, Xu Y
To Be Published
- Histone h2a type 1-c (14 kDa, Protein from Homo sapiens)
- Ruvb-like 2 (51 kDa, Protein from Homo sapiens)
- Vacuolar protein sorting-associated protein 72 homolog (40 kDa, Protein from Homo sapiens)
- Structure of nucleosome-bound srcap-c in the adp-bound state (Complex from Homo sapiens)
- Histone h3.1 (15 kDa, Protein from Homo sapiens)
- Yeats domain-containing protein 4 (26 kDa, Protein from Homo sapiens)
- Actin-like protein 6a (47 kDa, Protein from Homo sapiens)
- Ruvb-like 1 (50 kDa, Protein from Homo sapiens)
- Actin-related protein 6 (45 kDa, Protein from Homo sapiens)
- Actin, cytoplasmic 1 (41 kDa, Protein from Homo sapiens)
- Dna (147-mer) (45 kDa, DNA from synthetic construct)
- Histone h2b type 1-c/e/f/g/i (13 kDa, Protein from Homo sapiens)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Dna methyltransferase 1-associated protein 1 (53 kDa, Protein from Homo sapiens)
- Helicase srcap (343 kDa, Protein from Homo sapiens)
- Zinc finger hit domain-containing protein 1 (17 kDa, Protein from Homo sapiens)
- Dna (147-mer) (45 kDa, DNA from synthetic construct)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Histone h4 (11 kDa, Protein from Homo sapiens)
Formed alpha-synuclein fibrils after incubation with heparin for 1 hour (Hep-remod-1)
Resolution: 3.2 Å
EM Method: Helical reconstruction
Fitted PDBs: 8hzb
Q-score: 0.491
To Be Published
Formed alpha-synuclein fibrils after incubation with heparin for 1 hour (Hep-remod-2)
Resolution: 3.2 Å
EM Method: Helical reconstruction
Fitted PDBs: 8hzc
Q-score: 0.544
To Be Published
Formed alpha-synuclein fibrils after incubation with heparin for 3 days (Hep-remod-3)
Resolution: 3.3 Å
EM Method: Helical reconstruction
Fitted PDBs: 8hzs
Q-score: 0.52
To Be Published
CCA-bound alpha-synuclein fibrils
Resolution: 2.5 Å
EM Method: Helical reconstruction
Fitted PDBs: 7ynf
Q-score: 0.618
To Be Published